Yeah, I think you definately found the cause of the problem. What I would do is remove the seat to gain access to more of the carpet and dry out as much as possible. With the carpet propped up as high as you can go (doesn't really matter if some of the padding tears, it will go back together straight) aim the fan(s) under there. It will dry it out comletely. (I've done more than my share of flood cars down here in hurricane country) If you want some extra assurance, you can put down either baking soda or kitty litter under the carpet to absorb/stop and odors.

As for the collapsed drain hose, that is a tough one... I don't know if it has any connection points to replace pieces of it, so it may take trying to straighten it out. I'm wondering if a stretched out spring can be inserted to hold it open?

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