Cliff's notes: Do not pull the intake manifold to get at the separator. It is unnecessary. I have R&R'ed mine twice, and my manifold has never left the engine.
You do not need to take off the intake manifold to find/see/replace the separator on the 3.0i. Take off the air box, the silencer, and the throttle body boot. Remove the nuts/bolts that hold the vacuum manifold (gray box with lots of hoses and wires going into it, located under #7 in this
diagram. Push it aside, and disconnect whatever electrical leads allow you to do that. There are several right there, and they are only long enough to get to what they are supposed to go to, so do not worry if you need to disconnect them. They are spring loaded and go back on easily.
With that out of the way, you should see, under the intake manifold, a black plastic part with several hoses coming off of it. That is #1 in this
diagram.
There are two screws that hold the separator to the engine. They are not easy to get at, and the lower one requires taking of the throttle body (#5
here), which is held on by four bolts. Just take it off the block and let it dangle back towards the firewall.
If your separator has never been replaced and needs to be done, I would recommend replacing all of the associated
hoses , 2, 3, 4 and 7 in that diagram, plus the distribution piece (#5
here, which comes with new #6's installed).
That is the entire system. It takes blowby gases, unburned hydrocarbon (all bad for the crankcase), funnels them into the separator which sends liquid oil back into the pan (hose that comes off the bottom) and gases up to the distribution piece to be sent to every cylinder to be reignited. A good way to tell if your separator is working or not is taking off #7 in this
diagram and seeing if the insides of the manifold are covered in oily goo. If it is, the separator is not working right, as oil is getting sent back into the intake where it does not belong. This is usually accompanied by decrease in mileage, as the oil in the chambers forces the computer to add fuel via injectors to achieve the correct air/fuel ratio.